Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398786.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_207.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13234

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--458
171
2.6
171
77
5
421
35
14
12
35
1.84
1145--1458
169
1.9
170
83
2
416
36
13
12
36
1.83
1709--2242
171
3.1
168
74
5
498
33
12
12
39
1.81
2610--2657
23
2.1
22
88
11
71
25
8
12
54
1.65
4543--4857
171
1.8
171
83
2
418
43
12
10
33
1.77
4983--5300
171
1.9
171
82
2
406
39
14
12
33
1.83
11005--11322
171
1.9
155
76
12
289
32
15
12
34
1.84
12083--13234
171
6.8
171
77
8
955
34
14
12
38
1.84
12083--13234
342
3.4
340
81
5
1287
34
14
12
38
1.84
12114--13234
513
2.2
506
79
6
1226
35
14
12
38
1.83

Tables:   1

The End!