Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397411.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_425.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22619

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3634--3674
20
2.0
21
90
4
66
41
9
12
36
1.76
3492--5448
170
11.5
169
78
7
1560
34
14
11
38
1.82
5004--5044
21
2.0
21
85
0
55
48
9
14
26
1.75
7095--7628
170
3.1
170
76
6
433
40
11
11
35
1.78
7411--7731
173
1.9
174
82
5
409
38
12
13
36
1.82
8604--9182
173
3.4
172
77
4
594
38
10
12
37
1.77
10298--11576
169
7.5
169
71
4
633
36
10
13
34
1.80
10298--11576
170
7.5
170
71
3
784
36
10
13
34
1.80
11286--11325
21
1.9
21
84
0
53
22
15
10
52
1.71
11898--12483
170
3.5
169
81
2
663
34
15
10
38
1.82
13009--13040
12
2.7
12
95
0
55
56
25
6
12
1.59
12754--13666
170
5.3
170
75
7
739
36
14
11
38
1.82
14568--14607
21
1.9
21
84
0
53
22
15
10
52
1.71
14980--15819
170
4.9
171
70
7
462
37
10
13
33
1.80
15904--15935
12
2.7
12
95
0
55
12
6
25
56
1.59
16952--17469
170
3.0
166
77
6
459
36
11
15
34
1.83
18277--19524
172
7.3
171
72
6
553
38
11
12
34
1.80
18778--18812
12
2.9
12
91
0
52
68
8
0
22
1.16
19693--21306
170
9.5
171
74
6
781
38
11
12
34
1.80
19627--21436
172
10.6
170
74
6
1078
37
11
12
34
1.80
21507--22196
172
4.0
169
76
6
509
38
10
13
35
1.78

Tables:   1

The End!