Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018397413.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_363.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 22103
ACGTcount: A:0.19, C:0.09, G:0.08, T:0.21

Warning! 9394 characters in sequence are not A, C, G, or T


Found at i:8464 original size:40 final size:40

Alignment explanation


    Indices: 8409--8488  Score: 160
    Period size: 40  Copynumber: 2.0  Consensus size: 40

       8399 AGTGGAATAC

                                                    
       8409 TTATAAATGCTATTGAAGCTGAAATGTCTTTAAGATTTTT
          1 TTATAAATGCTATTGAAGCTGAAATGTCTTTAAGATTTTT

                                                    
       8449 TTATAAATGCTATTGAAGCTGAAATGTCTTTAAGATTTTT
          1 TTATAAATGCTATTGAAGCTGAAATGTCTTTAAGATTTTT

       8489 ATAACATCTT


Statistics
Matches: 40,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  40   40  1.00

ACGTcount: A:0.33, C:0.07, G:0.15, T:0.45


Consensus pattern (40 bp):   
TTATAAATGCTATTGAAGCTGAAATGTCTTTAAGATTTTT
Done.