Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398899.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2181.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15414

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3010--3320
169
1.9
158
84
7
333
37
12
12
34
1.81
2110--4209
171
12.3
170
70
6
869
36
11
12
33
1.80
5541--5927
171
2.3
170
79
5
404
39
11
12
36
1.80
6341--7605
171
7.4
171
73
5
736
36
11
15
34
1.83
7744--9179
171
8.4
170
70
8
755
37
10
12
35
1.78
9747--14211
171
26.2
168
69
6
1013
37
11
12
34
1.80
12505--13124
341
1.8
329
80
5
660
37
10
13
36
1.80
13616--14211
173
3.5
171
75
4
418
40
13
10
34
1.79
14705--15042
171
2.0
169
80
4
374
39
11
12
35
1.80

Tables:   1

The End!