Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398935.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2218.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2923

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--991
171
5.8
170
78
4
870
36
14
14
34
1.87
1--991
343
2.9
338
78
6
931
36
14
14
34
1.87
1276--2923
171
9.6
171
81
3
1638
36
13
14
35
1.86
1276--2921
343
4.8
342
82
4
1688
36
13
14
35
1.86
1998--2033
18
2.1
17
90
10
56
47
13
5
33
1.67

Tables:   1

The End!