Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398952.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2234.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8726

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2533--2909
165
2.3
167
81
5
431
37
11
12
38
1.80
2537--2951
170
2.5
165
82
5
476
37
12
11
38
1.80
2975--3395
173
2.4
173
80
5
476
37
13
14
34
1.85
3497--3978
171
2.8
169
79
6
483
37
10
11
37
1.77
4808--5087
149
1.9
149
84
1
373
36
12
11
39
1.79
4935--5573
171
3.7
171
83
4
781
36
13
11
37
1.82
5974--6402
172
2.5
171
78
4
452
33
14
11
37
1.83
7115--7545
170
2.5
171
84
3
537
36
15
13
34
1.87
7776--8088
171
1.8
171
83
4
416
33
12
12
41
1.81
7724--8111
171
2.3
171
79
3
415
35
12
13
38
1.83

Tables:   1

The End!