Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398990.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2270.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12283

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
645--1030
173
2.2
172
78
5
440
36
13
10
36
1.80
1441--1944
172
2.9
170
77
4
494
33
13
13
37
1.84
2467--3094
342
1.9
331
82
3
706
37
12
10
37
1.79
2467--3095
171
3.7
170
76
2
580
37
12
10
37
1.79
7610--8185
170
3.4
168
76
8
583
34
14
12
38
1.85
7424--8191
341
2.3
340
81
6
849
33
14
12
38
1.83
9224--9558
172
2.0
162
75
8
287
35
12
11
37
1.80
10144--10481
172
2.0
162
72
15
308
34
14
10
37
1.81

Tables:   1

The End!