Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399019.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2298.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6934

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
228--895
169
4.0
160
71
15
205
38
11
13
33
1.81
1--2515
171
14.8
169
76
6
1851
37
12
13
34
1.81
3--2515
340
7.4
338
75
6
1067
37
12
13
34
1.81
2798--3240
171
2.6
170
81
4
514
35
14
11
38
1.82
3631--4262
341
1.9
329
81
5
675
34
13
11
36
1.82
3395--4259
171
5.1
169
76
6
708
33
13
11
37
1.81
5130--5677
169
3.2
168
77
5
548
38
11
12
35
1.79
5901--6297
171
2.3
171
83
4
514
39
12
13
35
1.82
6656--6692
19
1.9
19
88
0
56
54
2
8
35
1.44

Tables:   1

The End!