Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399093.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2369.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14416

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--628
171
3.7
172
74
4
392
36
10
13
34
1.79
1129--1454
172
2.0
161
83
3
332
37
12
12
35
1.80
3773--4092
171
1.9
171
79
2
365
34
14
10
37
1.79
5278--7005
171
10.0
168
71
10
806
34
13
11
37
1.80
5285--7012
342
5.0
342
73
6
988
34
13
11
37
1.80
8045--8463
171
2.5
162
80
9
385
37
10
13
33
1.78
8045--8608
171
3.3
159
76
11
378
38
9
13
34
1.77
11629--11998
171
2.2
173
79
7
416
34
15
10
38
1.83
13373--13420
23
2.2
22
85
7
62
37
10
20
31
1.87

Tables:   1

The End!