Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399117.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2394.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16043

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
257--824
171
3.3
170
75
5
436
38
11
13
33
1.81
991--1507
171
3.0
166
74
6
446
37
12
13
35
1.82
2227--3424
170
7.0
170
72
5
689
36
11
12
34
1.79
2227--2986
341
2.2
330
79
5
666
35
11
13
35
1.81
2690--3330
343
1.9
314
80
5
448
36
11
13
34
1.80
3018--3424
173
2.4
172
85
3
525
40
10
13
35
1.79
3518--5300
171
10.4
169
75
5
1252
36
11
14
34
1.83
3518--5170
341
4.8
338
76
4
1293
36
11
14
34
1.83
6114--7777
171
9.7
170
74
6
858
37
10
13
35
1.79
6750--7369
339
1.8
331
81
4
680
36
11
13
37
1.81
8256--8698
169
2.6
169
78
7
473
40
9
12
37
1.76
9676--10485
171
4.8
169
76
4
653
35
12
11
37
1.79
10611--11300
171
4.0
170
71
6
543
34
12
11
36
1.80
11425--11743
161
2.0
160
84
6
423
36
13
13
36
1.84
13260--16043
171
16.3
169
72
6
1477
36
10
13
34
1.79
14851--15170
170
2.0
154
84
4
293
36
10
12
35
1.78

Tables:   1

The End!