Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399204.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2472.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8939

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1102--1142
21
1.9
21
85
5
55
21
14
9
53
1.70
1095--1420
167
1.9
171
80
7
380
39
11
11
36
1.79
3837--4279
172
2.6
172
78
4
448
38
12
12
34
1.81
5196--5546
172
2.1
171
78
4
368
38
9
12
37
1.75
7732--8260
170
3.1
170
78
8
439
38
9
13
37
1.79

Tables:   1

The End!