Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399276.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2545.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13735

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1485
171
8.7
171
72
5
855
37
12
12
33
1.82
378--1076
170
4.1
170
77
6
596
38
12
14
33
1.83
1815--2572
171
4.5
168
73
6
501
37
12
12
34
1.80
3924--4642
171
4.2
170
73
6
479
32
14
12
36
1.85
8740--10132
170
8.2
170
77
4
992
34
12
12
36
1.82
11159--11572
171
2.4
161
76
12
314
36
14
10
34
1.80
10933--11901
513
1.9
491
84
1
1024
34
12
10
34
1.78
12645--13430
171
4.6
171
73
5
590
34
12
10
38
1.79
12645--13441
342
2.3
330
86
4
861
33
13
10
38
1.79

Tables:   1

The End!