Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399291.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_256.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9324

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1080--1394
170
1.8
171
81
5
395
38
11
14
35
1.81
1456--1874
170
2.5
171
82
1
473
35
13
15
36
1.86
1463--1874
171
2.4
170
81
2
484
35
13
14
36
1.85
2317--3095
171
4.5
172
79
6
670
38
11
13
36
1.80
3297--3712
171
2.4
170
80
7
450
37
12
13
36
1.83
4835--5646
171
4.8
169
78
6
714
37
11
13
36
1.81
4835--5655
341
2.4
340
78
5
800
38
11
13
36
1.81
6529--6582
27
2.0
27
100
0
108
55
7
11
25
1.61
6360--6723
197
1.8
198
83
5
477
41
10
12
35
1.77
6556--7099
171
3.2
169
76
6
524
38
12
13
35
1.82
8140--9165
171
6.0
170
72
5
480
38
10
11
35
1.77

Tables:   1

The End!