Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399294.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2562.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10188

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--538
170
3.2
170
77
3
548
36
11
15
34
1.84
840--2050
170
7.1
168
79
7
1167
38
11
14
35
1.82
837--2050
341
3.6
340
84
3
1462
38
11
14
35
1.82
2390--2890
170
2.9
168
77
6
497
38
14
12
34
1.85
3647--4773
170
6.6
170
80
4
1083
37
11
14
36
1.83
3616--4773
341
3.4
337
81
5
1289
36
11
14
36
1.84
6292--7630
171
7.9
167
80
5
1143
38
11
14
35
1.82
6292--7615
341
3.9
337
78
7
1228
37
11
14
35
1.82
7748--8064
170
1.9
170
86
4
451
36
13
11
38
1.81
8290--8866
171
3.4
168
83
5
658
35
14
13
36
1.85

Tables:   1

The End!