Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399300.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_257.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24530

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
496--1525
171
6.0
169
77
5
888
36
11
13
35
1.81
499--1789
172
7.5
169
74
7
701
36
11
13
34
1.82
496--1597
515
2.1
513
73
5
1064
36
11
13
35
1.81
9729--11127
171
8.2
171
80
4
1419
35
13
11
38
1.82
9733--11127
513
2.7
510
81
5
1634
35
13
11
38
1.82
13700--15049
171
7.9
170
80
6
1384
37
11
14
36
1.82
15622--15756
67
2.0
67
92
0
225
25
17
17
39
1.91
15810--17354
171
9.0
169
77
7
1180
37
11
13
36
1.81
15689--21052
342
15.5
339
69
12
1838
37
11
13
35
1.80
15689--17278
513
3.1
507
77
6
1527
37
11
13
37
1.81
17474--20057
171
15.1
170
78
5
2200
38
11
13
36
1.81
17472--21029
513
6.9
509
77
8
2750
38
11
13
36
1.81
20031--20080
21
2.3
21
89
3
73
16
24
10
50
1.75
20050--21046
171
5.9
169
79
7
978
38
11
13
36
1.81
20932--21173
121
2.0
121
80
7
278
45
9
11
33
1.74
20769--21344
292
2.0
291
81
8
679
40
9
15
34
1.80
21055--21936
171
5.2
172
77
7
866
38
11
14
35
1.82
21974--22752
171
4.6
170
82
3
837
37
11
13
37
1.82
22953--23509
171
3.3
167
77
7
573
34
12
11
40
1.80
23589--23940
171
2.1
171
84
3
476
35
13
12
38
1.83

Tables:   1

The End!