Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399348.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2616.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9814

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1116
171
6.5
171
78
5
961
34
12
12
39
1.82
76--1061
512
1.9
513
80
5
1165
35
11
12
40
1.80
2515--2870
169
2.1
173
80
4
400
35
13
9
41
1.78
3645--4624
171
5.8
162
68
13
422
33
13
11
36
1.81
4774--5134
171
2.1
171
81
8
437
36
14
11
37
1.82
7497--7569
35
2.1
35
100
0
146
46
26
10
16
1.80

Tables:   1

The End!