Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399395.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2661.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6549

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--417
169
2.4
166
83
8
484
38
11
15
34
1.83
1778--1807
12
2.5
12
100
0
60
26
13
10
50
1.73
1849--2760
172
5.3
170
77
5
748
39
10
12
34
1.78
1934--2760
171
4.8
171
76
6
543
38
10
13
34
1.79
3278--3591
172
1.8
173
85
2
443
37
11
16
34
1.85
3759--5901
172
12.5
171
77
5
1804
38
11
13
34
1.80
3854--5900
515
4.0
514
77
6
1488
38
11
13
34
1.80

Tables:   1

The End!