Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018399452.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2716.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 6300
ACGTcount: A:0.22, C:0.07, G:0.07, T:0.23

Warning! 2586 characters in sequence are not A, C, G, or T


Found at i:2900 original size:14 final size:14

Alignment explanation


    Indices: 2881--2908  Score: 56
    Period size: 14  Copynumber: 2.0  Consensus size: 14

       2871 AGAAACATGT

                          
       2881 TTTAAATTTTATAA
          1 TTTAAATTTTATAA

                          
       2895 TTTAAATTTTATAA
          1 TTTAAATTTTATAA

       2909 CCTCATACCT


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   14  1.00

ACGTcount: A:0.43, C:0.00, G:0.00, T:0.57


Consensus pattern (14 bp):   
TTTAAATTTTATAA
Done.