Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399491.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2752.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4804

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1183--1267
25
3.1
28
75
21
83
69
3
0
27
1.05
1181--1249
6
10.7
6
72
20
50
73
2
0
23
0.96
1686--1721
15
2.4
15
90
0
54
25
27
13
33
1.94
1791--4616
171
16.6
170
72
6
1405
38
11
13
34
1.82
2245--3921
341
4.9
342
76
5
1069
38
11
13
34
1.81
3208--4465
514
2.5
510
78
5
1247
38
11
13
35
1.80

Tables:   1

The End!