Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399508.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2768.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7015

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
218--1923
172
10.0
169
73
8
892
36
11
14
35
1.81
1187--1776
170
3.5
159
76
12
463
38
12
12
34
1.82
1952--2565
171
3.6
169
78
9
626
37
13
12
35
1.83
2744--3051
170
1.8
170
82
1
393
37
11
12
35
1.80
4006--4519
172
3.0
170
81
4
471
39
10
13
36
1.79
3355--5015
171
9.7
171
71
3
601
36
11
12
35
1.79
5341--6087
170
4.4
171
74
5
648
37
12
12
36
1.81
6708--7015
171
1.8
171
85
4
433
39
11
14
34
1.82

Tables:   1

The End!