Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399509.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2769.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2616

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1298
171
7.6
169
74
7
785
36
11
13
35
1.82
1--1297
341
3.8
339
75
6
946
36
11
13
35
1.82
1--1302
512
2.5
508
76
6
1259
36
11
13
35
1.82
1422--2093
171
3.9
170
74
4
564
37
11
13
34
1.81
2264--2616
171
2.1
170
80
7
396
41
10
12
35
1.77

Tables:   1

The End!