Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397481.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_647.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13781

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
393--863
171
2.8
171
82
2
543
37
13
12
37
1.82
1572--2435
171
5.0
170
83
4
995
35
14
11
37
1.83
1572--2431
342
2.5
342
85
3
1145
36
14
11
37
1.83
3702--4056
168
2.1
169
84
4
466
38
12
14
34
1.84
4336--5170
171
4.9
171
78
7
738
40
11
13
34
1.82
4334--5170
342
2.4
336
80
9
899
40
11
13
34
1.82
5329--6294
171
5.7
171
78
5
902
37
12
14
36
1.83
5425--6289
341
2.5
341
79
5
933
38
12
14
35
1.83
7254--8468
171
7.1
169
81
7
1192
38
11
13
36
1.81
7254--8468
342
3.6
338
81
7
1354
38
11
13
36
1.81
7273--8465
513
2.3
511
81
7
1387
38
11
13
36
1.81
9442--11265
171
10.7
171
79
4
1643
37
12
13
35
1.82
11407--13758
171
13.7
171
78
5
2143
37
12
13
36
1.82
13092--13143
20
2.7
20
90
3
79
38
7
9
44
1.66
12959--13306
190
1.8
189
89
1
545
37
12
14
36
1.84
11407--13758
342
6.8
341
80
6
2363
37
12
13
36
1.82

Tables:   1

The End!