Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397483.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5010.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13429

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2252--3646
171
8.2
169
78
7
1212
39
11
13
35
1.81
2252--3646
341
4.1
334
76
9
1149
39
11
13
35
1.81
4073--6508
171
14.3
168
73
7
1361
37
10
13
34
1.79
6937--11270
341
12.7
341
73
6
1521
36
11
12
34
1.80
6700--12295
171
32.7
168
72
6
2516
36
11
12
34
1.80
11508--12178
343
2.0
330
79
4
643
37
11
13
34
1.80
12401--13429
171
6.0
171
73
5
744
37
12
13
34
1.82

Tables:   1

The End!