Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399575.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2828.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12237

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
728--1197
170
2.8
170
90
2
701
37
13
12
36
1.82
1649--2573
171
5.4
170
79
5
909
35
15
11
38
1.83
1654--2573
336
2.7
338
81
4
953
35
15
10
38
1.83
2828--3327
171
3.0
161
75
12
368
39
11
12
34
1.80
2990--3344
171
2.1
170
82
3
437
39
11
14
34
1.82
4173--4572
170
2.3
171
85
2
500
34
12
15
34
1.85
4730--5432
170
4.1
171
77
7
608
39
12
13
34
1.83
6405--6848
171
2.6
171
84
2
543
38
11
15
32
1.83
10090--11408
171
7.7
170
79
5
1203
38
12
13
35
1.82
10090--11408
341
3.9
338
77
6
1184
38
12
13
35
1.82

Tables:   1

The End!