Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399603.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2857.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4423

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--1134
171
6.7
170
79
5
1128
38
12
13
35
1.83
641--1029
172
2.3
172
82
4
446
40
10
14
34
1.80
711--1134
172
2.5
171
81
4
458
41
11
12
34
1.80
142--1134
502
2.0
499
82
3
1215
39
12
13
34
1.82
3250--3665
172
2.4
171
83
2
512
35
12
13
38
1.83
3976--4415
171
2.6
171
85
4
548
40
11
12
34
1.80

Tables:   1

The End!