Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399615.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2866.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7370

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--2122
171
12.4
170
73
5
1315
37
11
11
35
1.78
10--2122
341
6.2
339
73
7
1091
37
11
11
35
1.78
2751--4090
171
7.9
171
72
6
579
36
11
13
36
1.80
2751--3416
342
2.0
329
80
5
662
37
10
13
37
1.80
4342--4837
171
2.9
170
74
5
462
36
11
12
37
1.80
5220--5688
171
2.8
161
76
12
388
35
11
12
38
1.79
5689--6049
170
2.1
170
83
1
447
38
9
14
36
1.80
5418--6005
317
1.9
318
81
7
721
35
10
14
38
1.82

Tables:   1

The End!