Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399648.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2897.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11655

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1937
171
11.3
172
72
6
1165
35
11
10
38
1.76
3323--4176
171
5.0
167
74
6
633
35
11
11
39
1.79
4602--5018
171
2.4
170
81
3
426
41
11
11
35
1.77
5482--5794
172
1.8
171
80
6
373
38
10
15
35
1.82
5164--6205
170
6.1
169
72
6
658
38
12
11
34
1.80
6615--7543
171
5.4
171
70
6
459
35
11
13
34
1.81
9321--9743
172
2.5
171
83
5
525
41
9
11
36
1.75

Tables:   1

The End!