Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399652.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_290.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21956

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1531--1557
10
2.7
10
100
0
54
81
0
0
18
0.69
2894--3360
172
2.7
171
82
1
522
35
13
15
35
1.87
3575--3970
171
2.3
172
81
2
449
37
12
14
34
1.83
7024--7746
171
4.3
172
74
5
445
34
13
12
38
1.82
6822--7844
335
3.0
338
73
6
875
34
13
12
37
1.82
10998--12655
171
9.7
168
72
5
816
35
12
14
34
1.83
13272--13585
164
2.0
152
81
5
292
36
12
15
32
1.85
13887--14276
171
2.3
171
82
3
446
39
11
13
36
1.80
15803--16422
171
3.6
171
79
4
685
36
12
13
36
1.82
16629--16946
170
1.9
160
86
2
361
36
14
12
33
1.83
16629--17574
171
5.5
169
74
5
557
36
12
12
35
1.81
18163--19160
171
5.8
171
74
4
542
35
11
13
34
1.81
19421--19772
171
2.1
171
79
6
383
38
13
12
35
1.83
20838--21158
171
1.9
171
86
2
466
35
13
14
37
1.85
21626--21954
172
2.0
162
82
6
328
33
13
11
38
1.81

Tables:   1

The End!