Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397494.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3367.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12402

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
251--1374
171
6.6
169
76
4
848
33
13
11
36
1.82
252--1374
341
3.3
330
78
4
951
33
13
11
36
1.82
2083--2371
158
1.8
158
80
4
350
37
15
11
35
1.84
3975--4337
170
2.1
170
80
1
404
36
10
13
36
1.79
5343--5885
170
3.2
169
77
4
556
34
13
11
37
1.81
6473--7363
170
5.2
168
74
6
601
36
13
10
36
1.80
8031--8365
174
1.9
171
80
6
390
35
15
10
38
1.82
8391--8699
169
1.9
160
82
2
307
33
13
12
36
1.83
7703--9019
170
7.7
169
73
6
834
35
13
10
36
1.80
9154--11365
171
13.1
171
71
8
1199
34
13
11
36
1.80
9284--10441
170
6.8
169
73
10
720
35
13
10
37
1.80
9382--9975
329
1.8
330
84
4
822
35
13
12
37
1.84
10310--10592
150
1.9
151
83
2
372
38
12
11
37
1.79
10632--11365
341
2.2
331
82
1
752
34
13
11
37
1.80
11470--11889
171
2.5
171
81
2
477
35
15
11
37
1.84
11903--12220
172
1.9
162
83
5
331
35
12
10
38
1.78

Tables:   1

The End!