Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399713.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2959.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6029

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
447--759
171
1.8
171
80
6
384
37
12
11
39
1.78
617--917
171
1.8
161
81
3
291
36
10
10
38
1.75
1977--3636
171
9.7
169
69
6
519
35
11
12
33
1.80
2610--2634
10
2.5
10
100
0
50
64
8
8
20
1.46
3663--4681
171
6.0
171
72
5
459
36
11
12
34
1.79
3355--4674
342
3.9
334
71
5
815
35
11
12
34
1.79
5217--5649
171
2.5
169
80
5
498
37
10
12
39
1.77
5227--5799
171
3.4
169
78
4
492
35
11
12
38
1.79

Tables:   1

The End!