Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399761.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3003.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7105

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--1212
171
7.1
169
76
3
795
35
11
13
36
1.81
149--1399
341
3.7
341
78
6
1052
35
11
13
36
1.81
494--1162
170
4.0
161
76
11
415
36
12
13
36
1.82
152--1399
171
7.3
171
76
2
1040
35
11
13
36
1.81
2061--4082
171
11.8
171
74
5
1123
36
11
11
35
1.78
2061--4075
341
5.9
340
74
3
1383
36
11
11
35
1.78
2185--4085
512
3.7
511
76
3
1447
37
11
11
35
1.78
4345--4884
171
3.2
171
75
2
543
38
10
14
35
1.79
5717--6646
171
5.4
169
79
4
839
38
10
13
36
1.79
5717--6646
342
2.7
342
79
5
1011
38
10
13
36
1.79

Tables:   1

The End!