Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399799.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_304.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29381

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2275--2897
343
1.8
326
78
7
599
35
11
13
35
1.80
2253--3143
171
5.2
172
73
4
460
37
10
13
35
1.79
4066--4379
169
1.9
169
84
5
429
38
11
12
36
1.80
7002--7037
18
1.9
19
94
5
65
50
2
5
41
1.40
6733--7287
168
3.3
169
81
6
611
33
14
9
39
1.80
8105--8657
170
3.2
168
80
7
639
37
14
9
38
1.79
9283--10717
171
8.4
171
78
4
1328
35
12
11
39
1.81
12153--12472
171
1.9
163
83
7
328
35
13
10
36
1.80
12674--12998
169
2.0
157
78
10
332
33
12
10
40
1.77
17647--17959
169
1.9
169
84
2
423
34
16
12
36
1.87

Tables:   1

The End!