Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399855.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_309.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13553

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--804
169
4.7
170
75
9
653
39
12
13
32
1.83
170--813
339
1.9
329
81
9
779
40
12
13
32
1.82
849--2007
170
6.8
172
77
6
919
40
11
13
35
1.80
1931--2082
72
2.1
72
80
9
175
52
7
5
34
1.53
2002--3412
172
8.2
171
78
5
1319
38
11
14
36
1.81
1588--2356
415
1.9
415
84
4
1032
42
10
12
34
1.78
3815--5583
170
10.3
171
73
5
1145
38
10
12
35
1.78
3821--5583
340
5.2
341
75
4
1307
38
10
12
35
1.77
5567--5608
12
3.6
12
75
18
52
64
4
0
30
1.14
5564--5613
23
2.2
23
100
0
100
68
4
0
28
1.08
5619--7667
171
12.1
168
76
7
1500
38
11
13
35
1.80
5619--7667
341
6.0
336
75
8
1471
38
11
13
35
1.80
6176--7390
512
2.4
511
78
4
1162
38
10
12
35
1.79
10938--11441
172
2.9
170
75
6
451
37
11
12
35
1.80
12490--13553
170
6.2
170
74
7
706
37
12
11
35
1.79

Tables:   1

The End!