Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399879.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3112.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18629

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--815
171
4.8
170
74
4
448
35
13
10
34
1.80
1560--4128
171
15.0
169
79
6
2210
35
13
11
37
1.82
5571--6711
171
6.7
170
71
7
530
36
12
12
34
1.81
9016--9380
171
2.1
170
83
1
453
35
13
14
36
1.85
10176--12775
171
15.2
170
76
4
2026
37
12
13
34
1.82
14195--14284
40
2.3
40
96
3
166
46
14
5
33
1.68
15346--15710
171
2.1
171
80
4
389
38
11
14
34
1.83
16806--17301
171
3.0
161
75
10
335
38
12
12
34
1.80

Tables:   1

The End!