Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399905.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3139.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8312

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2052
172
12.0
170
74
5
1302
37
11
13
35
1.80
694--1350
173
3.9
166
79
5
511
37
11
14
35
1.82
2372--5447
171
18.0
171
74
5
1898
37
11
12
35
1.79
2378--4779
341
7.0
339
74
5
1645
38
11
12
35
1.79
6212--6519
165
1.9
165
80
5
363
38
13
11
36
1.80
7123--8304
171
6.9
170
76
6
939
35
13
12
37
1.82
7123--8311
510
2.3
512
79
5
1196
35
13
12
37
1.82

Tables:   1

The End!