Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397520.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1298.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10379

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--1486
171
8.6
173
74
7
905
35
13
10
37
1.80
1--1617
341
4.7
339
74
6
936
34
13
11
36
1.80
2378--2708
172
2.0
161
82
4
317
37
12
12
33
1.82
3600--4081
172
2.9
161
77
11
354
36
12
12
36
1.81
2359--4280
171
11.3
170
73
6
530
36
11
13
33
1.81
4774--5031
136
1.9
134
81
3
311
36
10
14
35
1.80
4940--5449
172
3.0
168
81
5
583
37
11
13
37
1.81
5628--9064
341
10.1
341
72
8
1072
36
11
13
34
1.82
5628--10255
683
6.8
679
76
5
2673
36
11
13
34
1.81
5628--10254
171
27.1
171
72
6
2492
36
11
13
34
1.81

Tables:   1

The End!