genome.fa.s2693.2.7.7.80.10.50.1000.1.html

Tandem Repeats Finder Program written by:

Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399946.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3175.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10646

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment

Table Explanation

Indices	Period Size	Copy Number	Consensus Size	Percent Matches	Percent Indels	Score	A	C	G	T	Entropy (0-2)
532--857	170	1.9	170	86	2	467	38	12	12	35	1.82
1365--1885	171	3.1	169	80	4	537	38	12	14	34	1.84
3227--5517	171	13.4	171	77	5	1754	39	13	13	33	1.83
3227--5585	342	6.9	339	77	5	2010	39	13	13	33	1.83
3309--5456	682	3.2	676	77	6	1781	39	13	13	34	1.83
8742--8788	21	2.2	21	88	0	76	59	12	19	8	1.58

Tables:   1

The End!