Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399993.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3219.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7482

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
728--2114
171
8.1
171
75
4
755
34
13
12
37
1.82
1440--1818
169
2.2
170
81
4
426
37
14
10
37
1.81
1440--2053
340
1.8
341
79
4
729
36
14
11
37
1.82
2278--2590
173
1.8
171
85
5
443
37
11
13
37
1.81
3448--3814
171
2.1
171
89
0
563
36
14
11
37
1.83
4581--4867
140
2.0
140
80
6
314
32
16
11
39
1.84
4722--5120
171
2.3
170
82
2
476
37
15
10
36
1.83
4415--5020
311
2.0
310
80
4
684
34
14
11
40
1.82
6895--7482
171
3.4
169
81
3
558
36
15
11
35
1.84

Tables:   1

The End!