Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400043.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3263.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8415

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
473--1258
171
4.6
168
78
9
698
39
11
13
34
1.82
473--1258
340
2.3
340
80
8
841
39
11
13
34
1.82
1608--2057
170
2.6
168
76
10
446
37
11
13
37
1.81
2148--2692
172
3.2
170
74
5
490
37
10
14
36
1.80
3019--3843
171
4.8
170
78
4
680
37
10
13
36
1.80
3023--3680
342
1.9
341
81
2
800
37
11
12
36
1.80
4074--4511
171
2.6
169
84
5
542
38
12
13
36
1.82
4565--5190
170
3.7
171
74
7
403
35
11
14
35
1.82
5404--5829
173
2.5
169
80
7
466
40
11
12
35
1.78
5319--5953
171
3.7
169
77
9
554
36
11
13
36
1.82
7258--7619
171
2.1
164
78
9
343
34
12
11
35
1.79

Tables:   1

The End!