Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400066.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3285.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5856

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1988--2361
170
2.2
172
73
3
387
37
12
14
33
1.83
2886--3556
171
3.9
171
74
2
434
36
12
13
33
1.83
4371--5704
171
7.8
171
78
6
1255
38
11
13
35
1.82
4377--5704
342
3.9
342
82
3
1398
38
11
13
35
1.81

Tables:   1

The End!