Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400126.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3342.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6142

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2567--2882
172
1.9
159
75
14
282
36
10
16
33
1.83
3194--3236
18
2.5
17
88
7
68
46
11
6
34
1.67
3200--3246
18
2.5
19
89
6
78
48
12
4
34
1.61
3219--3785
170
3.3
170
74
3
503
36
10
14
33
1.80
3933--4479
174
3.2
171
75
6
439
38
10
14
34
1.80
4138--4467
171
2.0
158
78
15
332
36
11
14
34
1.81

Tables:   1

The End!