Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400171.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_339.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8744

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
638--1072
171
2.5
169
84
6
563
37
11
13
36
1.82
1388--1760
171
2.2
171
80
1
390
39
11
13
35
1.82
1761--2325
171
3.3
169
77
7
491
40
11
13
34
1.81
3090--4781
171
9.9
171
80
5
1657
38
12
14
35
1.83
5020--5428
169
2.4
169
79
4
441
35
13
10
38
1.79
6265--6349
42
2.0
42
100
0
170
43
16
7
32
1.75
6857--7179
171
1.9
171
86
1
468
37
11
15
36
1.83

Tables:   1

The End!