Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400198.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3411.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8644

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1747--2731
169
5.8
169
81
6
940
36
14
10
38
1.81
2941--3254
172
1.9
154
82
3
254
37
10
10
35
1.75
3173--4722
338
4.6
338
76
7
1404
39
11
14
35
1.82
2877--4725
170
10.9
170
75
5
1326
38
11
14
35
1.81
2879--4724
850
2.2
850
81
4
2057
38
11
14
35
1.81

Tables:   1

The End!