Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397553.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4377.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7683

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
706--743
19
1.9
19
89
5
58
60
10
0
28
1.30
2506--2771
85
3.1
85
78
2
293
42
15
2
36
1.59
2636--2660
13
1.9
13
100
0
50
48
16
0
36
1.46
2721--2758
13
2.8
13
85
14
51
50
18
0
31
1.47
5706--5731
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!