Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400401.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_36.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31084

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1409--1754
170
2.0
170
81
3
392
34
14
9
37
1.80
8868--9191
173
1.9
162
83
3
337
36
9
11
39
1.74
8868--9382
172
3.0
171
79
4
471
35
12
10
38
1.77
13753--13809
22
2.6
22
100
0
114
31
26
10
31
1.90
13815--13901
32
2.7
32
90
0
138
17
28
18
35
1.93
16926--16993
32
2.1
32
94
0
118
32
20
30
16
1.94

Tables:   1

The End!