Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400425.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3622.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11233

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
674--722
18
2.8
18
76
14
57
55
12
0
32
1.37
541--870
171
1.9
170
80
6
380
38
11
13
36
1.82
729--1056
171
2.0
159
76
11
295
36
12
13
34
1.82
2965--3400
170
2.6
170
80
4
423
38
11
13
33
1.82
4299--6852
171
14.9
171
76
4
1948
39
11
13
34
1.81
4299--6852
512
5.0
506
79
5
2106
39
11
13
34
1.81
9126--9438
171
1.9
160
81
3
297
35
13
13
35
1.83
10544--10859
170
1.9
162
82
5
318
37
11
14
33
1.82

Tables:   1

The End!