Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397586.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3034.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5989

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--681
171
4.0
170
81
3
726
37
13
14
35
1.85
1--681
342
2.0
342
81
4
809
37
13
14
35
1.85
411--974
293
1.9
293
81
3
670
39
14
11
34
1.82
1385--2692
172
7.6
172
80
4
1205
39
12
13
34
1.83
1329--2955
171
9.5
170
79
3
1291
38
12
13
35
1.83
676--5977
342
15.6
338
74
9
2918
38
12
13
34
1.83
3862--5888
171
11.8
170
76
7
1287
38
13
14
34
1.84
2956--5956
513
5.9
506
74
9
2052
38
12
14
33
1.84

Tables:   1

The End!