Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400659.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3846.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4963

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--78
21
1.9
21
84
0
53
30
7
12
50
1.68
458--500
21
2.0
21
81
0
50
23
20
9
46
1.79
367--1309
171
5.5
169
70
7
541
38
11
12
33
1.80
358--1323
342
2.8
338
79
3
927
38
11
13
33
1.80
1918--3191
682
1.9
666
79
7
1345
39
11
12
34
1.79
1348--3286
171
11.3
169
74
5
960
37
11
12
34
1.80
2157--3268
511
2.2
498
76
10
1013
38
11
12
35
1.80
3945--4373
169
2.5
169
76
7
388
40
10
13
35
1.80

Tables:   1

The End!