Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018397606.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_108.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4925
ACGTcount: A:0.17, C:0.08, G:0.07, T:0.18

Warning! 2463 characters in sequence are not A, C, G, or T


Found at i:2374 original size:19 final size:19

Alignment explanation


    Indices: 2350--2387  Score: 76
    Period size: 19  Copynumber: 2.0  Consensus size: 19

       2340 GTAATGCTAC

                               
       2350 GTTTCCACTTTTCTATCTT
          1 GTTTCCACTTTTCTATCTT

                               
       2369 GTTTCCACTTTTCTATCTT
          1 GTTTCCACTTTTCTATCTT

       2388 ATTATGCAAC


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  19   19  1.00

ACGTcount: A:0.11, C:0.26, G:0.05, T:0.58


Consensus pattern (19 bp):   
GTTTCCACTTTTCTATCTT
Done.