Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400837.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4008.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1099

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--57
27
2.2
26
96
3
105
54
0
0
45
0.99
751--898
25
5.7
24
65
20
59
67
0
4
28
1.09
808--862
27
2.1
26
82
3
65
70
0
1
27
0.97
753--861
55
2.0
55
80
7
123
66
0
3
29
1.08
814--893
14
5.8
14
71
16
51
68
0
3
27
1.06
854--917
16
3.9
16
72
20
51
65
1
4
28
1.21

Tables:   1

The End!